Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793161.1_cds_XP_016432265.1_2782
CDS Infomation

[gene=LOC107758930] [db_xref=GeneID:107758930] [protein=calcium-dependent protein kinase 20-like] [protein_id=XP_016432265.1] [location=complement(join(33967..34047,34217..34441,35281..35448,35831..35946,36904..37056,37161..37304,38746..39559))] [gbkey=CDS]
Sequence

ATGGGGAATACATGCTCGGGACCCACTTTGAACAAAGATTCAGCAGATTCATCAAAGACA
GAAGCAAAAGGTTCTGATTCTGTTAGCTCTAATGTCCAGAACACCCCTCCTCCCCATCTT
CAGATACCTGGAGATCAGCCTCAGGATGACAAATCAAGAAATTCCCAAAAGGGTGTCAAA
GTGGAAGACACTAATAAAAACAGCAGTGCAAATGGAAATGATACCGTTACCAATAAGCCA
GTGGAGGATGTGAAAAGAAACAAGTCTAGTAATCTTAAGCGAGTATTGAGTGCAGGGCTT
CAAGTTGAATCTGTTTTGGGACGAAAAACAGGCAATTTGAAAGAAATTTATACTCTAGGA
AGGAAACTAGGACAAGGGCAATTTGGAACAACGTTTTTGTGCGTGGACAAAGCTCAAGCA
AAGGAATTTGCATGTAAGTCAATTGCTAAAAGGAAGTTGACAACTGAAGAGGATATAGAG
GATGTAAGGAGAGAGATTCAGATAATGCACCACTTGGCAGGGCACCCTAGCGTTGTACAG
ATTGTTGGGGCTTATGAGGATGCTGTTGCTGTTCATGTCGTAATGGAGCTTTGCGCTGGT
GGGGAGCTGTTCGATAGGATTATTAAAAGGGGGCATTATTCAGAAAAGAAGGCTGCTGAA
CTTGCAAGAGTAATAGTAGGTGTTGTAGAAGCATGCCATTCATTGGGAGTTATGCACAGG
GACCTCAAACCTGAGAACTTCCTTTTTGTCAACGAGCAAGAGGAGTCGCCGTTAAAGACC
ATTGACTTTGGGTTATCTATGTTCTTTAGACCAGGTGAAACCTTCACCGATGTCGTTGGA
AGCCCTTACTATGTGGCCCCAGAAGTCTTGCGGAAGTGTTATGGTCCAGAATGTGATATT
TGGAGTGCTGGAGTGATTATTTATATACTTCTTAGTGGTGTGCCTCCATTTTGGGATGAA
ACGGAGCAAGGAATATTTGAACAGATTGTGAAAGGGGAACTTGACTTAGTATCAGAACCT
TGGCCAGCTATATCAGAAAGTGCAAAAGATCTGGTCAGAAGAATGCTTGCGAGAGATCCC
AAAAAGCGGGTTACAGCTCATGAAGTTCTCTGTCACCCGTGGGTCCGTGTAGGTGGGGTT
GCTCCAGATAAGCCTCTTGATTCTGCTGTTCTTACTCGGCTCAATCAATTTTCTGCAATG
AATAAATTAAAGAAGATAGCAATCAGAGTTATTGCTGAAAATCTGTCCGGAGAGGAAATT
GCAGGACTGAAGCAAATGTTCAAAATGATAGACGCAGATAACAGTGGACATATTACGCTA
GAGGAACTGAAAAAGGGTCTGGAAAAAGTGGGTGCCAATCTTAAGGATTCAGAAATTAAT
AGTTTAATGCAAGCGGCAGATATGGATAATAGTGGTACCATTGACTATGGTGAGTTTATT
GCTGCTATGCTCCATCTAAACAAAGTTCAGAAGGAGGATCACATGTACGCCGCCTTTTCA
TATTTTGATCAAGATGGTAGCGGATATATTACACAGGAAGAGCTCCAACAGGCTTGTGAG
AAGTTTGGTTTGAGCAATATTCCCATGGAAGAACTTATGCGTGAAGTCGATCAAGATAAT
GATGGGCGCATTGATTACAATGAATTTGTAGCAATGATGCAAGATACAGGCTTTGGTAAG
AATGGTAACAAAAGAGTGTGA

Peptide Sequence

PEP ID

XP_016432265.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 20-like [Nicotiana tabacum]
Sequence

MGNTCSGPTLNKDSADSSKTEAKGSDSVSSNVQNTPPPHLQIPGDQPQDDKSRNSQKGVK
VEDTNKNSSANGNDTVTNKPVEDVKRNKSSNLKRVLSAGLQVESVLGRKTGNLKEIYTLG
RKLGQGQFGTTFLCVDKAQAKEFACKSIAKRKLTTEEDIEDVRREIQIMHHLAGHPSVVQ
IVGAYEDAVAVHVVMELCAGGELFDRIIKRGHYSEKKAAELARVIVGVVEACHSLGVMHR
DLKPENFLFVNEQEESPLKTIDFGLSMFFRPGETFTDVVGSPYYVAPEVLRKCYGPECDI
WSAGVIIYILLSGVPPFWDETEQGIFEQIVKGELDLVSEPWPAISESAKDLVRRMLARDP
KKRVTAHEVLCHPWVRVGGVAPDKPLDSAVLTRLNQFSAMNKLKKIAIRVIAENLSGEEI
AGLKQMFKMIDADNSGHITLEELKKGLEKVGANLKDSEINSLMQAADMDNSGTIDYGEFI
AAMLHLNKVQKEDHMYAAFSYFDQDGSGYITQEELQQACEKFGLSNIPMEELMREVDQDN
DGRIDYNEFVAMMQDTGFGKNGNKRV

Transcript Sequence

Gene sequence data has not been registered.